AcRF Tier 2 Influenza

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11 to 20 of 33 Results

VI2VI-creation.docx Aug 19, 2019 - Virulence Information for Influenza Virus Infection (VI2VI) in Mice MS Word - 303.1 KB - MD5: 9f34c1a16970ba2add0bf7a9971638f5 Documentation Description of methods and steps taken for creating VI2VI datasets.
VI2VI-preprocessed.7z Aug 19, 2019 - Virulence Information for Influenza Virus Infection (VI2VI) in Mice 7Z Archive - 47.9 KB - MD5: e3c84250d93d54ce1008bdc98b07fa94 Data Initial VI2VI dataset - preprocessed VI2VI-raw datasets (determining the lower or upper bound for MLD50, adding the virulence classes, etc.).
VI2VI-raw.7z Aug 19, 2019 - Virulence Information for Influenza Virus Infection (VI2VI) in Mice 7Z Archive - 195.3 KB - MD5: 69173c9f01ff34c77757033cc2672950 Data Raw infection datasets collected from literature.
supplementary.rar Apr 22, 2019 - Computational identiﬁcation of physicochemical signatures for host tropism of inﬂuenza A virus RAR Archive - 254.6 KB - MD5: 85b8c43ddde662b94f4bb7794f6310af Additional files for Computational identification of physicochemical signatures for host tropism of influenza A virus
data_stacking.rar Apr 22, 2019 - Influenza H1N1 antigenic and sequence data RAR Archive - 17.4 KB - MD5: 63cecff67aba04f501e2fc870034bba4 This is the first published version.
VI2VI-mice-x-virus.tab Apr 15, 2019 - Virulence Information for Influenza Virus Infection (VI2VI) in Mice Tabular Data - 10.4 KB - 9 Variables, 114 Observations - UNF:6:GXjIYZ2XzOP0MGFfufjelA== Data Cleaned VI2VI dataset that provide virulence information of infections of a specific influenza virus strain in a specific mouse strain (redundant experiments were singled out).
VI2VI-virus.tab Apr 15, 2019 - Virulence Information for Influenza Virus Infection (VI2VI) in Mice Tabular Data - 9.9 KB - 9 Variables, 112 Observations - UNF:6:gqvKgcptk1lEZuvF5Db8ng== Data Cleaned VI2VI dataset that provide virulence information of influenza viruses (mouse strains were ignored and most virulent information was considered for virulence label).
code-data.zip Apr 3, 2019 - Code and data for CFreeEnS ZIP Archive - 80.3 MB - MD5: c31ae8f272b49954def356f35979cd43 code for CFreeEnS and datasets for testing.
Additional file 1.pdf Mar 22, 2019 - Additional files for: Computational analysis of the receptor binding specificity of novel influenza A/H7N9 viruses. Adobe PDF - 117.4 KB - MD5: 7dde51d3fa705019bbf92e5017f057bd Phylogenetic trees of influenza A/H7N9. Time scale phylogenetic trees of PB2, PB1, PA, HA, NP, NA, M1 and NS1 genes of influenza H7N9 strain.
Additional file 2.pdf Mar 22, 2019 - Additional files for: Computational analysis of the receptor binding specificity of novel influenza A/H7N9 viruses. Adobe PDF - 466.8 KB - MD5: b008295a026bd26d374895e3beef8c4a Superimpose the best and worst docked HA-ligand complexes. Visualize the structure of docked SH13-LSTa, SH13-LSTc, TW17-LSTa and TW17-LSTc complexes with the highest and the lowest binding affinities.

VI2VI-creation.docx

Aug 19, 2019 - Virulence Information for Influenza Virus Infection (VI2VI) in Mice

MS Word - 303.1 KB -

Documentation

Description of methods and steps taken for creating VI2VI datasets.

VI2VI-preprocessed.7z

Aug 19, 2019 - Virulence Information for Influenza Virus Infection (VI2VI) in Mice

7Z Archive - 47.9 KB -

Data

Initial VI2VI dataset - preprocessed VI2VI-raw datasets (determining the lower or upper bound for MLD50, adding the virulence classes, etc.).

VI2VI-raw.7z

Aug 19, 2019 - Virulence Information for Influenza Virus Infection (VI2VI) in Mice

7Z Archive - 195.3 KB -

Data

Raw infection datasets collected from literature.

supplementary.rar

Apr 22, 2019 - Computational identiﬁcation of physicochemical signatures for host tropism of inﬂuenza A virus

RAR Archive - 254.6 KB -

Additional files for Computational identification of physicochemical signatures for host tropism of influenza A virus

data_stacking.rar

Apr 22, 2019 - Influenza H1N1 antigenic and sequence data

RAR Archive - 17.4 KB -

This is the first published version.

VI2VI-mice-x-virus.tab

Apr 15, 2019 - Virulence Information for Influenza Virus Infection (VI2VI) in Mice

Tabular Data - 10.4 KB - 9 Variables, 114 Observations -

Data

Cleaned VI2VI dataset that provide virulence information of infections of a specific influenza virus strain in a specific mouse strain (redundant experiments were singled out).

VI2VI-virus.tab

Apr 15, 2019 - Virulence Information for Influenza Virus Infection (VI2VI) in Mice

Tabular Data - 9.9 KB - 9 Variables, 112 Observations -

Data

Cleaned VI2VI dataset that provide virulence information of influenza viruses (mouse strains were ignored and most virulent information was considered for virulence label).

code-data.zip

Apr 3, 2019 - Code and data for CFreeEnS

ZIP Archive - 80.3 MB -

code for CFreeEnS and datasets for testing.

Additional file 1.pdf

Mar 22, 2019 - Additional files for: Computational analysis of the receptor binding specificity of novel influenza A/H7N9 viruses.

Adobe PDF - 117.4 KB -

Phylogenetic trees of influenza A/H7N9. Time scale phylogenetic trees of PB2, PB1, PA, HA, NP, NA, M1 and NS1 genes of influenza H7N9 strain.

Additional file 2.pdf

Mar 22, 2019 - Additional files for: Computational analysis of the receptor binding specificity of novel influenza A/H7N9 viruses.

Adobe PDF - 466.8 KB -

Superimpose the best and worst docked HA-ligand complexes. Visualize the structure of docked SH13-LSTa, SH13-LSTc, TW17-LSTa and TW17-LSTc complexes with the highest and the lowest binding affinities.

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