Appointment: PhD student (Graduated)

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31 to 35 of 35 Results
sequence_unselect.pl
Aug 18, 2022 - Related Data for: Rapid and precise characterization of eukaryotic marine microalgae in the coastal waters of Singapore with third generation sequencing (Part 1)
Unknown - 4.7 KB - MD5: e283dbb2bfc48860f02fa8bd5cdc1dd2
script used with wrapper script 2
serialscript-1.sh
Aug 18, 2022 - Related Data for: Rapid and precise characterization of eukaryotic marine microalgae in the coastal waters of Singapore with third generation sequencing (Part 1)
Shell Script - 1.1 KB - MD5: 1fa6c23ba6177f06411e94c193cadfce
Script used to assign job for wrapper_script_1 on server
SILVA_138.1_LSURef_tax_eukaryota_DNA.fasta
Aug 18, 2022 - Related Data for: Rapid and precise characterization of eukaryotic marine microalgae in the coastal waters of Singapore with third generation sequencing (Part 1)
Unknown - 87.9 MB - MD5: ecac3ec84dcd83f64e2e4750ec92b6e1
28S rDNA references used for taxonomic assignment
wrapper_script_1_basecall_demultiplex_barcodes_gpu_cpu.sh
Aug 18, 2022 - Related Data for: Rapid and precise characterization of eukaryotic marine microalgae in the coastal waters of Singapore with third generation sequencing (Part 1)
Shell Script - 9.0 KB - MD5: 12914d39b6ebdd4c94cd2a549c3d9538
Nanopore sequenced reads are first processed with wrapper_script_1
wrapper_script_2_cluster_barcodes_raw_minimap2_racon_cpu.sh
Aug 18, 2022 - Related Data for: Rapid and precise characterization of eukaryotic marine microalgae in the coastal waters of Singapore with third generation sequencing (Part 1)
Shell Script - 42.5 KB - MD5: 3727e7ba4787992918d90fe78fa6c954
Each barcode/sample folder is then processed with wrapper_script_2
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