Christaline George

Appointment: PhD student (Graduated)

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21 to 30 of 35 Results

model_sel_ml_nucleotide.mao Aug 18, 2022 - Related Data for: Rapid and precise characterization of eukaryotic marine microalgae in the coastal waters of Singapore with third generation sequencing (Part 1) Unknown - 1.8 KB - MD5: b2a11860c5256cd4735eaf15942118db analyses file used to assess aligned Nanopore consensus sequences to identify model for phylogenetic tree construction
muscle_align_nucleotide.mao Aug 18, 2022 - Related Data for: Rapid and precise characterization of eukaryotic marine microalgae in the coastal waters of Singapore with third generation sequencing (Part 1) Unknown - 1.5 KB - MD5: 8039b4b563063b4a1266f4cc7985feae analyses file used to align Nanopore consensus sequences prior to phylogenetic tree construction
outgroup_full.fasta Aug 18, 2022 - Related Data for: Rapid and precise characterization of eukaryotic marine microalgae in the coastal waters of Singapore with third generation sequencing (Part 1) Unknown - 17.3 KB - MD5: 497f9c93407d0d008e217ae4bf832c82 full-length rDNA reference sequences of outgroup species used to align reads of individual microalgal species and tree generation
outgroup_pr2.fasta Aug 18, 2022 - Related Data for: Rapid and precise characterization of eukaryotic marine microalgae in the coastal waters of Singapore with third generation sequencing (Part 1) Unknown - 5.7 KB - MD5: 8cc0ac56a7f8e1977bd1c203a9049d4e 18S rDNA reference sequences of outgroup species from PR2 databsase used to align reads of individual microalgal species and tree generation
phylogenetic_analyses.sh Aug 18, 2022 - Related Data for: Rapid and precise characterization of eukaryotic marine microalgae in the coastal waters of Singapore with third generation sequencing (Part 1) Shell Script - 2.3 KB - MD5: da5e3ed8c9f78a040edfae376547e893 Script used to construct phylogenetic trees
phylo_ref_all.fasta Aug 18, 2022 - Related Data for: Rapid and precise characterization of eukaryotic marine microalgae in the coastal waters of Singapore with third generation sequencing (Part 1) Unknown - 186.3 KB - MD5: 7b48536bc8725c21f87b105c8388208c full-length rDNA reference sequences used to align reads of individual microalgal species and tree generatione
pr2_version_4.13.0_18S_taxo_long.fasta Aug 18, 2022 - Related Data for: Rapid and precise characterization of eukaryotic marine microalgae in the coastal waters of Singapore with third generation sequencing (Part 1) Unknown - 273.1 MB - MD5: 53da1e7625df156fc88e35493491c269 18S references used for taxonomic assignment
raw_error_rates_select.sh Aug 18, 2022 - Related Data for: Rapid and precise characterization of eukaryotic marine microalgae in the coastal waters of Singapore with third generation sequencing (Part 1) Shell Script - 6.9 KB - MD5: 47a6226f3c9329b4a415407e3d3df3c2 script used to asses error rates of Nanopore consensus
sequence_select.pl Aug 18, 2022 - Related Data for: Rapid and precise characterization of eukaryotic marine microalgae in the coastal waters of Singapore with third generation sequencing (Part 1) Unknown - 4.8 KB - MD5: 8d825406eda9fef0666bd4887e90a1c8 script used with wrapper script 1
sequence_select_size.pl Aug 18, 2022 - Related Data for: Rapid and precise characterization of eukaryotic marine microalgae in the coastal waters of Singapore with third generation sequencing (Part 1) Unknown - 3.2 KB - MD5: f6fb0a9f4e54a28c48bcaf8f453698ab script used in wrapper_script_1 to filter Nanopore reads of desired length

model_sel_ml_nucleotide.mao

Aug 18, 2022 - Related Data for: Rapid and precise characterization of eukaryotic marine microalgae in the coastal waters of Singapore with third generation sequencing (Part 1)

Unknown - 1.8 KB -

analyses file used to assess aligned Nanopore consensus sequences to identify model for phylogenetic tree construction

muscle_align_nucleotide.mao

Aug 18, 2022 - Related Data for: Rapid and precise characterization of eukaryotic marine microalgae in the coastal waters of Singapore with third generation sequencing (Part 1)

Unknown - 1.5 KB -

analyses file used to align Nanopore consensus sequences prior to phylogenetic tree construction

outgroup_full.fasta

Aug 18, 2022 - Related Data for: Rapid and precise characterization of eukaryotic marine microalgae in the coastal waters of Singapore with third generation sequencing (Part 1)

Unknown - 17.3 KB -

full-length rDNA reference sequences of outgroup species used to align reads of individual microalgal species and tree generation